Package: jSDM 0.2.7
jSDM: Joint Species Distribution Models
Fits joint species distribution models ('jSDM') in a hierarchical Bayesian framework (Warton and al. 2015 <doi:10.1016/j.tree.2015.09.007>). The Gibbs sampler is written in 'C++'. It uses 'Rcpp', 'Armadillo' and 'GSL' to maximize computation efficiency.
Authors:
jSDM_0.2.7.tar.gz
jSDM_0.2.7.zip(r-4.5)jSDM_0.2.7.zip(r-4.4)jSDM_0.2.7.zip(r-4.3)
jSDM_0.2.7.tgz(r-4.5-x86_64)jSDM_0.2.7.tgz(r-4.5-arm64)jSDM_0.2.7.tgz(r-4.4-x86_64)jSDM_0.2.7.tgz(r-4.4-arm64)jSDM_0.2.7.tgz(r-4.3-x86_64)jSDM_0.2.7.tgz(r-4.3-arm64)
jSDM_0.2.7.tar.gz(r-4.5-noble)jSDM_0.2.7.tar.gz(r-4.4-noble)
jSDM_0.2.7.tgz(r-4.4-emscripten)jSDM_0.2.7.tgz(r-4.3-emscripten)
jSDM.pdf |jSDM.html✨
jSDM/json (API)
NEWS
| # Install 'jSDM' in R: |
| install.packages('jSDM', repos = c('https://ghislainv.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ghislainv/jsdm/issues
Pkgdown site:https://ecology.ghislainv.fr
Last updated 2 years agofrom:5879f4da6e. Checks:4 OK, 8 NOTE. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 07 2025 |
| R-4.5-win-x86_64 | NOTE | Mar 07 2025 |
| R-4.5-mac-x86_64 | NOTE | Mar 07 2025 |
| R-4.5-mac-aarch64 | NOTE | Mar 07 2025 |
| R-4.5-linux-x86_64 | NOTE | Mar 07 2025 |
| R-4.4-win-x86_64 | NOTE | Mar 07 2025 |
| R-4.4-mac-x86_64 | NOTE | Mar 07 2025 |
| R-4.4-mac-aarch64 | NOTE | Mar 07 2025 |
| R-4.4-linux-x86_64 | NOTE | Mar 07 2025 |
| R-4.3-win-x86_64 | OK | Mar 07 2025 |
| R-4.3-mac-x86_64 | OK | Mar 07 2025 |
| R-4.3-mac-aarch64 | OK | Mar 07 2025 |
Exports:get_enviro_corget_residual_corinv_logitjSDM_binomial_logitjSDM_binomial_probitjSDM_binomial_probit_long_formatjSDM_binomial_probit_sp_constrainedjSDM_gaussianjSDM_poisson_loglogitplot_associationsplot_residual_cor
Dependencies:codacodetoolscorrplotdoParallelforeachiteratorslatticeMASSRcppRcppArmadilloRcppGSLstringi
